What’s the temperature where you are? If it is below freezing was it setting in warmer shed prior to this? Water in the rear end has possibly frozen the bull gears is my guess. Have you had any experience with a Farmall shifter that has locked in two gears. Usually the shifter movement and position is off when that happens, so you probably would not report that it shifts into all the gears. When this happens it may act like it is in gear in neutral, but locks when you try to shift into another gear. Also another thing that rarely stops them from moving is a ball bearing falling out of a warn ball bearing like for the inner axle bearing behind the bull gears. The ball gets between the bull gear and case. Usually doesn’t stop the tractor it generally just cracks and pushes the rear cast under the bull gear out and gear oil starts leaking out.
In case it is locked in two gears here it what you need to do.
Directions when Farmall is stuck in 2 gears
Your gear shift just came out of position and didn’t shift it out of the gear you were using just before this problem came to light. Now when you shift into another gear you are in two gears at the same time. Gear ratios have a little problem with that and lock up the drivetrain. If possible move the gearshift so the tractor moves when the clutch is let out, this makes sure two of your shift rails are in neutral. Pull the cotter pin out on the gearshift above the spring, pull the spring and the bell off. Next you will need a metal screw and a drill bit to drill a hole for it. On the sides of the shifter support that raises out of the deck cover are expansion plugs. Drill into the center of the one one the clutch side with the bit. Then hopefully you have a hex head metal screw, with a drill/driver run the screw into the hole and hopefully it will pop the plug out. You could do this all with a regular screwdriver but it is less fun. When that plug is out take a punch and drive the gear shift pivot pin out towards the center of the tractor as the pin comes out this will drive out the plug on the opposite side. When the pin is out pull the gearshift out. Look down in there with a light and move the offending shift rail to its neutral position with a longer bar or large screwdriver. You may have to set on the seat and hold down the clutch to do this if the tractor is not on the level. When in the right position the three separate shift rails should form one continuous channel about 2 1/2” long. I am linking a diagram of what the shift lever bottom tip should look like when not worn. If it is really worn down or rounded of quite a bit it probably needs welded up and ground to the dimensions shown.
Link for gear shift dimensions??
Old YT post with shifter dimensions